miRBase entry: bma-mir-153

Stem-loop bma-mir-153


Accession
MI0013345
Description
Brugia malayi bma-mir-153 precursor miRNA
Gene family
MIPF0000050; mir-153

Literature search
2 open access papers mention bma-mir-153
(5 sentences)

Sequence

uuccgcucgucgaucauuuuuguggauuagcaauuuuguucucgaauaaUUGCAUAGUCACAAAAGUGAUGgacgugaagcgucguuugu
...((((((((.((((((((((((.(((((((((((((....)))..)))))).)))))))))))))))).))))...))))........

Structure
-----uuc    ---    g            g    -      --   u 
        cgcu   cguc aucauuuuugug auua gcaauu  uug u
        ||||   |||| |||||||||||| |||| ||||||  |||  
        gcga   gcag UAGUGAAAACAC UGAU CGUUaa  agc c
uguuugcu    agu    G            -    A      ua   u 


Annotation confidence Not enough data
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Genome context
Unknown

Database links

Mature bma-miR-153

Accession MIMAT0014119
Description Brugia malayi bma-miR-153 mature miRNA
Sequence 50 - UUGCAUAGUCACAAAAGUGAUG - 71
Evidence experimental
Northern [1], Illumina [2]

References

  1. PubMed ID: 19874857
    Cloning and bioinformatic identification of small RNAs in the filarial nematode, Brugia malayi
    "Poole CB, Davis PJ, Jin J, McReynolds LA"
    "Mol Biochem Parasitol (2010) 169:87-94

  2. PubMed ID: 24824352
    Diversity and expression of microRNAs in the filarial parasite, Brugia malayi
    Poole CB, Gu W, Kumar S, Jin J, Davis PJ, Bauche D, McReynolds LA
    PLoS One (2014) 9:e96498