miRBase entry: ath-MIR2933b

Stem-loop ath-MIR2933b


Accession
MI0013363
Description
Arabidopsis thaliana ath-MIR2933b precursor miRNA
Gene family
MIPF0001072; MIR2933

Literature search
1 open access papers mention ath-MIR2933b
(1 sentences)

Sequence

gaaauucguuggcgauuuugagugaaaucggagagggaauucgucggugauuuugaguGAAAUCGGAGAGGAAAUUCGCCggcgauuuugagugaaaucggagaggaaaauc
....(((.((..((((((((...(((((((..(.(.((((((.((..(((((((....)))))))..)).).))))).))..)))))))...))))))))..)).)))....

Structure
gaaa   g  gg        agu       ga a g     - g  gg       g 
    uuc uu  cgauuuug   gaaaucg  g g gaauu c uc  ugauuuu a
    ||| ||  ||||||||   |||||||  | | ||||| | ||  |||||||  
    aag ag  gcuaaagu   uuuuagc  C C CUUAA G AG  GCUAAAG g
cuaa   g  ag        gag       gg - G     A G  AG       u 


Annotation confidence Not enough data
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Genome context
chr3: 17402762-17402873 [-]

Database links

Mature ath-miR2933b

Accession MIMAT0014137
Description Arabidopsis thaliana ath-miR2933b mature miRNA
Sequence 59 - GAAAUCGGAGAGGAAAUUCGCC - 80
Evidence experimental
454 [1]

References

  1. PubMed ID: 20042113
    MicroRNA and tasiRNA diversity in mature pollen of Arabidopsis thaliana
    Grant-Downton R, Le Trionnaire G, Schmid R, Rodriguez-Enriquez J, Hafidh S, Mehdi S, Twell D, Dickinson H
    BMC Genomics (2009) 10:643