Stem-loop rco-MIR160b

Accession

MI0013380

Description

Ricinus communis rco-MIR160b precursor miRNA

Gene family

MIPF0000032; MIR160

Literature search

2 open access papers mention rco-MIR160b
(4 sentences)

Sequence

gguuaUGCCUGGCUCCCUGUAUGCCAcaagcuagaguucauucccuuccauggauuggcuauugccgguggcgugcgaggagccaagcauacucuc
((.(((((.(((((((.((((((((((..((...(((.((.(((.......))).)))))...))..)))))))))).))))))).))))).))..

Structure

--  u     C       C          aa  uag   u  u   cu 
  gg uaUGC UGGCUCC UGUAUGCCAc  gc   agu ca ucc  u
  || ||||| ||||||| ||||||||||  ||   ||| || |||  c
  cu auacg accgagg gcgugcggug  cg   ucg gu agg  c
cu  c     a       a          gc  uua   -  u   ua 

Annotation confidence Not enough data

Genome context

EQ977159.1: 1207-1302 [+]

Mature rco-miR160b

• Accession: MIMAT0014154
• Description: Ricinus communis rco-miR160b mature miRNA
• Sequence: 6 - UGCCUGGCUCCCUGUAUGCCA - 26
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995