Stem-loop rco-MIR166b

Accession

MI0013387

Description

Ricinus communis rco-MIR166b precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

2 open access papers mention rco-MIR166b
(5 sentences)

Sequence

ugaggggaauguugucuggcucgaggucacuaauuagaucuaugauuuuauuuuugcuuuuaagauagaucguugaucguauuguuagugacgUCGGACCAGGCUUCAUUCCCCccaau
((.((((((((..((((((.((((.(((((((((..((((.(((((((.(((((.......)))))))))))).)))).....))))))))).)))).))))))..)))))))).))..

Structure

--  a        uu      c    g         ---ua    u       u     ug 
  ug ggggaaug  gucugg ucga gucacuaau     gauc augauuu auuuu  c
  || ||||||||  |||||| |||| |||||||||     |||| ||||||| |||||  u
  ac CCCCUUAC  CGGACC GGCU cagugauug     cuag ugcuaga uagaa  u
ua  c        UU      A    g         uuaug    u       -     uu 

Annotation confidence Not enough data

Genome context

EQ973832.1: 399591-399709 [+]

Mature rco-miR166b

• Accession: MIMAT0014161
• Description: Ricinus communis rco-miR166b mature miRNA
• Sequence: 94 - UCGGACCAGGCUUCAUUCCCC - 114
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995