miRBase entry: rco-MIR168

Stem-loop rco-MIR168


Accession
MI0013394
Description
Ricinus communis rco-MIR168 precursor miRNA
Gene family
MIPF0000081; MIR168

Literature search
2 open access papers mention rco-MIR168
(5 sentences)

Sequence

cuaauUCGCUUGGUGCAGGUCGGGAAcugauuggcuuuucuauuucuaaugauuuccaggcggcgaaaaguuauuggucaagauuagauggaaagugaauuggaucccgccuugcaucaacugaaucgaag
...(((((.((((((((((.(((((.((((((.(((((((....((((((.....((((..(((.....))).)))).....)))))).))))))).)))))).))))).)))))))))).))))).....

Structure
--cua     C          U     A      g       uauu      gauuu    gc   g 
     auUCG UUGGUGCAGG CGGGA cugauu gcuuuuc    ucuaau     ccag  ggc a
     ||||| |||||||||| ||||| |||||| |||||||    ||||||     ||||  ||| a
     uaagu aacuacguuc gcccu gguuaa ugaaagg    agauua     gguu  uug a
gaagc     c          c     a      g       ---u      gaacu    -a   a 


Annotation confidence Not enough data
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Genome context
EQ973781.1: 686511-686641 [+]

Database links

Mature rco-miR168

Accession MIMAT0014168
Description Ricinus communis rco-miR168 mature miRNA
Sequence 6 - UCGCUUGGUGCAGGUCGGGAA - 26
Evidence experimental
RT-PCR [1]

References

  1. PubMed ID: 19942686
    Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
    "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
    "Nucleic Acids Res (2010) 38:981-995