Stem-loop rco-MIR171b

Accession

MI0013399

Description

Ricinus communis rco-MIR171b precursor miRNA

Gene family

MIPF0000030; MIR171_1

Literature search

3 open access papers mention rco-MIR171b
(8 sentences)

Sequence

guacgagauauuggugcgguucaaucagagaucauugcucuauauauagagcuuuuguuguuugaUUGAGCCGUGCCAAUAUCACGugcau
(((((.(((((((((((((((((((((((.(.((..((((((....))))))...)).).))))))))))))))))))))))).)))))..

Structure

--     a                       g u  -uu      u 
  guacg gauauuggugcgguucaaucaga a ca   gcucua a
  ||||| ||||||||||||||||||||||| | ||   ||||||  
  cguGC CUAUAACCGUGCCGAGUUaguuu u gu   cgagau u
ua     A                       g u  uuu      a 

Annotation confidence Not enough data

Genome context

EQ973828.1: 404395-404485 [+]

Mature rco-miR171b

• Accession: MIMAT0014173
• Description: Ricinus communis rco-miR171b mature miRNA
• Sequence: 66 - UUGAGCCGUGCCAAUAUCACG - 86
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995