Stem-loop sequence rco-MIR171d

Accession

MI0013401 (change log)

Description

Ricinus communis miR171d stem-loop

Gene family

MIPF0000030; MIR171_1

Literature search

3 open access papers mention rco-MIR171d
(8 sentences)

Stem-loop

   --ugu         c       c     caaaaacgauguguuuucucaagcauuuguuuuu 
5'      gauguuggc cgguuca ucaga                                  c
        ||||||||| ||||||| |||||                                   
3'      cuauaaccg gccgagu aguuu                                  g
   ugauu         u       u     ccgguaauacgaacacaauuguauaguucgcaaa 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_RCG_1.1; JCVI_RCG_1.1): EQ973772.1: 3804732-3804855 [-]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0013401

Mature sequence rco-miR171d

• Accession: MIMAT0014175
• Sequence: 99 - ugauugagccgugccaauauc - 119
• Evidence: experimental; RT-PCR [1]

References

1. PMID:19942686 "Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants" Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M Nucleic Acids Res. 38:981-995(2010).