Stem-loop sequence rco-MIR171f

Accession

MI0013403 (change log)

Description

Ricinus communis miR171f stem-loop

Gene family

MIPF0000030; MIR171_1

Literature search

3 open access papers mention rco-MIR171f
(8 sentences)

Stem-loop

   --  u         c       c     -    ---a   cuau    uc  cu  u 
5'   ug gauauuggc ugguuca ucaga caug    aac    cccu  uc  gc u
     || ||||||||| ||||||| ||||| ||||    |||    ||||  ||  || a
3'   ac cuauaaccg gccgagu aguuu guau    uug    ggga  ag  cg u
   ug  u         u       u     u    aucg   uugu    ua  uc  u 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_RCG_1.1; JCVI_RCG_1.1): EQ974221.1: 175562-175672 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0013403

Mature sequence rco-miR171f

• Accession: MIMAT0014177
• Sequence: 86 - ugauugagccgugccaauauc - 106
• Evidence: experimental; RT-PCR [1]

References

1. PMID:19942686 "Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants" Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M Nucleic Acids Res. 38:981-995(2010).