Stem-loop sequence rco-MIR172

Accession

MI0013405 (change log)

Description

Ricinus communis miR172 stem-loop

Gene family

MIPF0000035; MIR172

Literature search

3 open access papers mention rco-MIR172
(11 sentences)

Stem-loop

   --   a  g                a  aacuu    -u    -   g       uu ug ucccuuuucuuuuu 
5'   cug ug agcaucaucaagauuc ca     uauc  aggg cua uggguug  g  g              c
     ||| || |||||||||||||||| ||     ||||  |||| ||| |||||||  |  |              u
3'   ggc ac ucguaguaguucuaag gu     auag  uccc gau accuaac  c  u              u
   ac   g  g                g  -----    uu    u   a       uu gu cucuuuuucuuuuu 

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (JCVI_RCG_1.1; JCVI_RCG_1.1): EQ974292.1: 52781-52924 [+]
• Overlapping transcripts:

  intergenic

Database links

• miRBase Tracker:MI0013405

Mature sequence rco-miR172

• Accession: MIMAT0014179
• Sequence: 119 - ggaaucuugaugaugcugcag - 139
• Evidence: experimental; RT-PCR [1]

References

1. PMID:19942686 "Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants" Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M Nucleic Acids Res. 38:981-995(2010).