Stem-loop rco-MIR319b

Accession

MI0013407

Description

Ricinus communis rco-MIR319b precursor miRNA

Gene family

MIPF0000010; MIR159

Literature search

2 open access papers mention rco-MIR319b
(4 sentences)

Sequence

aagaaggagcucucuucaguccaguccaaggcgguugagggcugggacuuagcugcugacucguugguucaagagcucaucaucaucaauguguaagagaugucuuuuugauccaacgaagcuggagcuguguucaguuauggcugucaugucUUGGACUGAAGGGAGCUCCCUccaau
..((.(((((((((((((((((((..((.((((((((..((((((.((.(((((.(.(..(((((((.(((((((..((((.((............))))))..))))))).)))))))..).).))))).)))))))).)))))))).))..))))))))))))))))))).))....

Structure

--aa  a                   uc  a        ag      g  u     g u ac       u       cu    a  aucaa 
    ga ggagcucucuucaguccag  ca ggcgguug  ggcugg ac uagcu c g  ucguugg ucaagag  cauc uc     u
    || |||||||||||||||||||  || ||||||||  |||||| || ||||| | |  ||||||| |||||||  |||| ||      
    cU CCUCGAGGGAAGUCAGGUU  gu cugucggu  uugacu ug gucga g c  agcaacc aguuuuu  guag ag     g
uaac  C                   cu  a        -a      -  u     g u ga       u       cu    -  aaugu 

Annotation confidence Not enough data

Genome context

EQ974005.1: 22062-22240 [+]

Mature rco-miR319b

• Accession: MIMAT0014181
• Description: Ricinus communis rco-miR319b mature miRNA
• Sequence: 154 - UUGGACUGAAGGGAGCUCCCU - 174
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995