Stem-loop rco-MIR390b

Accession

MI0013411

Description

Ricinus communis rco-MIR390b precursor miRNA

Gene family

MIPF0000101; MIR390

Literature search

1 open access papers mention rco-MIR390b
(25 sentences)

Sequence

cuaauAAGCUCAGGAGGGAUAGCGCCauggauggauauguguuuuuaugaauaugacucgucuuuucuuggcuugcuuuuuuuaucucuucuauagcgcuauccauccugaguuucauuggu
(((((((((((((((.(((((((((.(((((.(((((.((((((....)))))).....(((.......)))..........)))))..))))).))))))))).)))))))))).))))).

Structure

-     -          G         C     -u     ---------------------------u      u 
 cuaau AAGCUCAGGA GGAUAGCGC augga  ggaua                            guguuu u
 ||||| |||||||||| ||||||||| |||||  |||||                            ||||||  
 gguua uuugaguccu ccuaucgcg uaucu  ucuau                            uauaag a
u     c          a         a     uc     uuuuuucguucgguucuuuucugcucag      u 

Annotation confidence Not enough data

Genome context

EQ974008.1: 153671-153792 [+]

Mature rco-miR390b

• Accession: MIMAT0014185
• Description: Ricinus communis rco-miR390b mature miRNA
• Sequence: 6 - AAGCUCAGGAGGGAUAGCGCC - 26
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995