Stem-loop rco-MIR395a

Accession

MI0013413

Description

Ricinus communis rco-MIR395a precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

2 open access papers mention rco-MIR395a
(7 sentences)

Sequence

cuagaguucccuugaacacuucacugggacgaaaauccauucuuccaaCUGAAGUGUUUGGGGGAACUCuuggu
(.(((((((((((((((((((((.(((((.(((......))))))))..))))))))))))))))))))).)..

Structure

-- u                     -c     c   aa 
  c agaguucccuugaacacuuca  uggga gaa  u
  | |||||||||||||||||||||  ||||| |||   
  g uCUCAAGGGGGUUUGUGAAGU  accuu cuu  c
ug u                     Ca     -   ac 

Annotation confidence Not enough data

Genome context

EQ973849.1: 133932-134005 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from rco-MIR395a

Mature rco-miR395a

• Accession: MIMAT0014187
• Description: Ricinus communis rco-miR395a mature miRNA
• Sequence: 49 - CUGAAGUGUUUGGGGGAACUC - 69
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995