Stem-loop rco-MIR395b

Accession

MI0013414

Description

Ricinus communis rco-MIR395b precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

2 open access papers mention rco-MIR395b
(7 sentences)

Sequence

cuggaguuccccuggccgcuucauuggggcuauuauauacccuuaauuauacauguguuauuccugcccuaCUGAAGUGUUUGGGGGAACUCuaggu
(((((((((((((((.(((((((.((((((......((((..............)))).......)))))).))))))).)))))))))))))))..

Structure

--               c       u      -uauuau    ccuuaa 
  cuggaguuccccugg cgcuuca uggggc       auac      u
  ||||||||||||||| ||||||| ||||||       ||||       
  gauCUCAAGGGGGUU GUGAAGU aucccg       ugug      u
ug               U       C      uccuuau    uacaua 

Annotation confidence Not enough data

Genome context

EQ973849.1: 150771-150867 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from rco-MIR395b

Mature rco-miR395b

• Accession: MIMAT0014188
• Description: Ricinus communis rco-miR395b mature miRNA
• Sequence: 72 - CUGAAGUGUUUGGGGGAACUC - 92
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995