Stem-loop rco-MIR395c

Accession

MI0013415

Description

Ricinus communis rco-MIR395c precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

2 open access papers mention rco-MIR395c
(7 sentences)

Sequence

cuagaguucccuugagcacuucacugggaugaaaaaagguccagucuuccuuccuaCUGAAGUGUUUGGGGGAACUCcuggu
(((((((((((((((((((((((.(((((.......(((.........)))))))).))))))))))))))))))).)))).

Structure

-    -                   c     ugaaaaa   ucc 
 cuag aguucccuugagcacuuca uggga       agg   a
 |||| ||||||||||||||||||| |||||       |||   g
 gguc UCAAGGGGGUUUGUGAAGU auccu       ucc   u
u    C                   C     -------   uuc 

Annotation confidence Not enough data

Genome context

EQ973849.1: 142167-142248 [+]

Clustered miRNAs

3 other miRNAs are < 10 kb from rco-MIR395c

Mature rco-miR395c

• Accession: MIMAT0014189
• Description: Ricinus communis rco-miR395c mature miRNA
• Sequence: 57 - CUGAAGUGUUUGGGGGAACUC - 77
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995