Stem-loop rco-MIR395d

Accession

MI0013416

Description

Ricinus communis rco-MIR395d precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

2 open access papers mention rco-MIR395d
(7 sentences)

Sequence

cuagaguucccuugaccacuucauuguggauuauucuucaagcucaaggaguugguuuacaCUGAAGUGUUUGGGGGAACUCcuggu
(((((((((((((((.(((((((.(((((((((..((((........)))).))))))))).))))))).))))))))))).)))).

Structure

-    -           c       u         uu    aag 
 cuag aguucccuuga cacuuca uguggauua  cuuc   c
 |||| ||||||||||| ||||||| |||||||||  ||||    
 gguc UCAAGGGGGUU GUGAAGU acauuuggu  gagg   u
u    C           U       C         -u    aac 

Annotation confidence Not enough data

Genome context

EQ973849.1: 136644-136730 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from rco-MIR395d

Mature rco-miR395d

• Accession: MIMAT0014190
• Description: Ricinus communis rco-miR395d mature miRNA
• Sequence: 62 - CUGAAGUGUUUGGGGGAACUC - 82
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995