Stem-loop sequence rco-MIR399a

AccessionMI0013422 (change log)
DescriptionRicinus communis miR399a stem-loop
Gene family MIPF0000015; MIR399
Literature search

2 open access papers mention rco-MIR399a
(7 sentences)

Stem-loop 
   -- ug       c     gc           ----ag    cac  gc 
5'   u  uagggca cucuu  uuggcagguaa      ggga   ua  u
     |  ||||||| |||||  |||||||||||      ||||   ||  a
3'   a  gucccgu gagag  aaccguucguu      cccu   au  g
   uc gu       u     ga           caauaa    aca  ac
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (JCVI_RCG_1.1; JCVI_RCG_1.1) Overlapping transcripts
EQ973773.1: 464925-465017 [+]
intergenic
Clustered miRNAs
< 10kb from rco-MIR399a
rco-MIR399dEQ973773.1: 461879-461981 [+]
rco-MIR399aEQ973773.1: 464925-465017 [+]
Database links

Mature sequence rco-miR399a

Accession MIMAT0014196
Sequence

68 -  

ugccaaaggagaguugcccug

 - 88

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Evidence experimental; RT-PCR [1]

References

1
PMID:19942686 "Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants" Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M Nucleic Acids Res. 38:981-995(2010).