Stem-loop rco-MIR399d

Accession

MI0013425

Description

Ricinus communis rco-MIR399d precursor miRNA

Literature search

2 open access papers mention rco-MIR399d
(7 sentences)

Sequence

ucguagggcaucucucgcuuggcaggcaaugauaugaagugaagcuaaauuuuagcauuaguuugaucccaauggcuUGCCAAAGGAGAGCUGCCCUGugacu
((((((((((.(((((..(((((((((...(((..(((.(((.(((((...))))).))).))).)))......)))))))))..))))).))))))))))..

Structure

--          u     gc         ---aau   au   g   a     a 
  ucguagggca cucuc  uuggcaggc      gau  gaa uga gcuaa  
  |||||||||| |||||  |||||||||      |||  ||| ||| ||||| u
  aguGUCCCGU GAGAG  AACCGUucg      cua  uuu auu cgauu  
uc          C     GA         guaacc   -g   g   a     u 

Annotation confidence Not enough data

Genome context

EQ973773.1: 461879-461981 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from rco-MIR399d

Mature rco-miR399d

• Accession: MIMAT0014199
• Description: Ricinus communis rco-miR399d mature miRNA
• Sequence: 78 - UGCCAAAGGAGAGCUGCCCUG - 98
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995