Stem-loop rco-MIR399f

Accession

MI0013427

Description

Ricinus communis rco-MIR399f precursor miRNA

Gene family

MIPF0000015; MIR399

Literature search

2 open access papers mention rco-MIR399f
(7 sentences)

Sequence

uuacugagcaagucuucuuugacagacuuccaccaagcgacauauggaaacguggauuaucUGCCAAAGGAGAUUUGCUCACuaacu
(((.(((((((((((((((((.((((..(((((....(........)....)))))...)))).))))))))))))))))).)))..

Structure

--   c                 a    -cu     caag gac 
  uua ugagcaagucuucuuug caga   uccac    c   a
  ||| ||||||||||||||||| ||||   |||||    |    
  aau ACUCGUUUAGAGGAAAC GUcu   aggug    g   u
uc   C                 C    auu     caaa gua 

Annotation confidence Not enough data

Genome context

EQ973891.1: 134636-134722 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from rco-MIR399f

Mature rco-miR399f

• Accession: MIMAT0014201
• Description: Ricinus communis rco-miR399f mature miRNA
• Sequence: 62 - UGCCAAAGGAGAUUUGCUCAC - 82
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995