miRBase entry: rco-MIR403b

Stem-loop rco-MIR403b


Accession
MI0013429
Description
Ricinus communis rco-MIR403b precursor miRNA
Gene family
MIPF0000290; MIR403

Literature search
1 open access papers mention rco-MIR403b
(1 sentences)

Sequence

ucucuaguuugugcgugaaucgagccccaucaucaaggccguucauuuugaggccccacgaauccaauggugUUAGAUUCACGCACAAACUCGugauc
((.(.((((((((((((((((.(((.((((..((..((((...........))))....)).....)))).))).)))))))))))))))).).))..

Structure
--  u u                g   c    ---ca  --aa    guuc 
  uc c aguuugugcgugaauc agc ccau     uc    ggcc    a
  || | |||||||||||||||| ||| ||||     ||    ||||    u
  ag G UCAAACACGCACUUAG UUg ggua     ag    ccgg    u
cu  u C                A   u    accua  cacc    aguu 


Annotation confidence Not enough data
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Genome context
EQ973835.1: 375406-375503 [-]

Database links

Mature rco-miR403b

Accession MIMAT0014203
Description Ricinus communis rco-miR403b mature miRNA
Sequence 73 - UUAGAUUCACGCACAAACUCG - 93
Evidence experimental
RT-PCR [1]

References

  1. PubMed ID: 19942686
    Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
    "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
    "Nucleic Acids Res (2010) 38:981-995