Stem-loop rco-MIR408

Accession

MI0013430

Description

Ricinus communis rco-MIR408 precursor miRNA

Gene family

MIPF0000102; MIR408

Literature search

2 open access papers mention rco-MIR408
(3 sentences)

Sequence

aaagacugggaacaggcagugcauggauggggcuacuaacagaaaacaucuguuuuggcucuacccCUGCACUGCCUCUUCCCUGGCuuccg
.(((...(((((.((((((((((.((.((((((((..((((((.....)))))).)))))))).)).)))))))))).)))))...)))...

Structure

--a   acu     c          u  a        cu      a 
   aag   gggaa aggcagugca gg uggggcua  aacaga a
   |||   ||||| |||||||||| || ||||||||  |||||| a
   uuC   CCCUU UCCGUCACGU cc aucucggu  uugucu c
gcc   GGU     C          C  c        -u      a 

Annotation confidence Not enough data

Genome context

EQ973790.1: 821262-821353 [+]

Mature rco-miR408

• Accession: MIMAT0014204
• Description: Ricinus communis rco-miR408 mature miRNA
• Sequence: 67 - CUGCACUGCCUCUUCCCUGGC - 87
• Evidence: experimental ; RT-PCR [1]

References

1. PubMed ID: 19942686
   Conservation and divergence of microRNAs and their functions in Euphorbiaceous plants
   "Zeng C, Wang W, Zheng Y, Chen X, Bo W, Song S, Zhang W, Peng M"
   "Nucleic Acids Res (2010) 38:981-995