miRBase entry: aae-mir-286b-2

Stem-loop aae-mir-286b-2


Accession
MI0013520
Description
Aedes aegypti aae-mir-286b-2 precursor miRNA
Gene family
MIPF0000225; mir-286

Literature search
3 open access papers mention aae-mir-286b-2
(7 sentences)

Sequence

3 reads, 0 reads per million, 1 experiments
aaguccuggggcgauugucggcuuagucgcuguaucauuucaacugcugugcaguucuucgcuagUGACUAGACCGAACACUCGUAUCCCaggccuu
(((.((((((((((.((((((.((((((((((.........((((((...))))))......)))))))))).))).))).))))..)))))).)))

Structure
   u      --    u   -   c          uaucauuuc      u 
aag ccuggg  gcga ugu cgg uuagucgcug         aacugc  
||| ||||||  |||| ||| ||| ||||||||||         |||||| g
uuc ggaCCC  UGCU ACA GCC GAUCAGUgau         uugacg  
   c      UA    C   A   A          ---cgcuuc      u 


Annotation confidence Not enough data
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Genome context
supercont1.602: 93476-93572 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from aae-mir-286b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature aae-miR-286b

Accession MIMAT0014313
Description Aedes aegypti aae-miR-286b mature miRNA
Sequence 66 - UGACUAGACCGAACACUCGUAUCCC - 90
Evidence experimental
454 [1]

References

  1. PubMed ID: 19961592
    Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
    Li S, Mead EA, Liang S, Tu Z
    BMC Genomics (2009) 10:581