miRBase entry: aae-mir-286a

Stem-loop aae-mir-286a


Accession
MI0013521
Description
Aedes aegypti aae-mir-286a precursor miRNA
Gene family
MIPF0000225; mir-286

Literature search
2 open access papers mention aae-mir-286a
(5 sentences)

Sequence

1 reads, 0 reads per million, 1 experiments
aucguuauuuggggcgauugucggacuagucgcugcguacaaaacggaacuauuucaacuagUGACUAGACCGAACACUCGCGUCCUaaagcacgau
(((((..((((((((((.((((((.((((((((((.((...................)))))))))))).))).))).))))..))))))..)))))

Structure
     ua      --    u   -   a          c  acaaaacg 
aucgu  uuuggg  gcga ugu cgg cuagucgcug gu        g
|||||  ||||||  |||| ||| ||| |||||||||| ||        a
uagca  aaaUCC  CGCU ACA GCC GAUCAGUgau ca        a
     cg      UG    C   A   A          -  acuuuauc 


Annotation confidence Not enough data
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Genome context
supercont1.464: 824995-825091 [+]
Clustered miRNAs
3 other miRNAs are < 10 kb from aae-mir-286a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature aae-miR-286a

Accession MIMAT0014314
Description Aedes aegypti aae-miR-286a mature miRNA
Sequence 63 - UGACUAGACCGAACACUCGCGUCCU - 87
Evidence experimental
454 [1]

References

  1. PubMed ID: 19961592
    Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
    Li S, Mead EA, Liang S, Tu Z
    BMC Genomics (2009) 10:581