miRBase entry: cqu-mir-281-1

Stem-loop cqu-mir-281-1


Accession
MI0013564
Description
Culex quinquefasciatus cqu-mir-281-1 precursor miRNA
Gene family
MIPF0000087; mir-46

Literature search
1 open access papers mention cqu-mir-281-1
(1 sentences)

Sequence

uucugcaguuucgaaugugaaaauaAAGAGAGCUAUCCGUCGACAGUagggauaugauucacUGUCAUGGAAUUGCUCUCUUUauguacaauucgauauucaacagu
..(((.(((.(((((((((...(((((((((((..(((((.((((((.((........)))))))))))))...))))))))))).))).)))))).)))...))).

Structure
uu   --c   u      -   aaa           -UA     C      a  gau 
  cug   agu ucgaau gug   auaAAGAGAGC   UCCGU GACAGU gg   a
  |||   ||| |||||| |||   |||||||||||   ||||| |||||| ||    
  gac   uua agcuua cau   uaUUUCUCUCG   AGGUA CUGUca cu   u
-u   aac   u      a   --g           UUA     -      -  uag 


Annotation confidence Not enough data
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Genome context
supercont3.1661: 13232-13338 [+]

Database links

Mature cqu-miR-281-5p

Accession MIMAT0014358
Description Culex quinquefasciatus cqu-miR-281-5p mature miRNA
Sequence 26 - AAGAGAGCUAUCCGUCGACAGU - 47
Evidence experimental
Illumina [1]

Mature cqu-miR-281-3p

Accession MIMAT0014359
Description Culex quinquefasciatus cqu-miR-281-3p mature miRNA
Sequence 63 - UGUCAUGGAAUUGCUCUCUUU - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119