miRBase entry: cqu-mir-13

Stem-loop cqu-mir-13


Accession
MI0013571
Description
Culex quinquefasciatus cqu-mir-13 precursor miRNA
Gene family
MIPF0000049; mir-2


Sequence

guucaguucguaaaaaugguugugccguguguacauuugaacauucaauauucaUAUCACAGCCAUUUUGACGAGUuugaac
((((((.((((.((((((((((((..(((((.....((((....))))....))))))))))))))))).))))..))))))

Structure
      -u    a            cc     uacau    a 
guucag  ucgu aaaaugguugug  gugug     uuga c
||||||  |||| ||||||||||||  |||||     ||||  
caaguu  AGCA UUUUACCGACAC  UAUac     aacu a
      UG    G            --     -uuau    u 


Annotation confidence Not enough data
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Genome context
supercont3.366: 116988-117069 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from cqu-mir-13
Name Accession Chromosome Start End Strand Confidence




Database links

Mature cqu-miR-13

Accession MIMAT0014368
Description Culex quinquefasciatus cqu-miR-13 mature miRNA
Sequence 55 - UAUCACAGCCAUUUUGACGAGU - 76
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119