miRBase entry: cqu-mir-993

Stem-loop cqu-mir-993


Accession
MI0013577
Description
Culex quinquefasciatus cqu-mir-993 precursor miRNA
Gene family
MIPF0000033; mir-10


Sequence

agcgcuccuccgugaccUACCCUGUAGUUCCGGGCUUUUgugguuaacaaaaauauauuaucaGAAGCUCGUUUCUAUAGAGGuaucucacagggugaa
..(((.(((..((((..((((((((((...((((((((((((((............)))).))))))))))...)))))).))))..))))))))))..

Structure
ag   u   cc    cc    -      UUC          -    uaaca 
  cgc ccu  guga  UACC CUGUAG   CGGGCUUUUg uggu     a
  ||| |||  ||||  |||| ||||||   |||||||||| ||||      
  gug gga  cacu  auGG GAUAUC   GCUCGAAGac auua     a
aa   -   --    cu    A      UUU          u    uauaa 


Annotation confidence Not enough data
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Genome context
supercont3.12: 55470-55568 [+]

Database links

Mature cqu-miR-993-5p

Accession MIMAT0014375
Description Culex quinquefasciatus cqu-miR-993-5p mature miRNA
Sequence 18 - UACCCUGUAGUUCCGGGCUUUU - 39
Evidence experimental
Illumina [1]

Mature cqu-miR-993-3p

Accession MIMAT0014376
Description Culex quinquefasciatus cqu-miR-993-3p mature miRNA
Sequence 64 - GAAGCUCGUUUCUAUAGAGG - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119