miRBase entry: cqu-mir-989

Stem-loop cqu-mir-989


Accession
MI0013586
Description
Culex quinquefasciatus cqu-mir-989 precursor miRNA
Gene family
MIPF0000885; mir-989

Literature search
1 open access papers mention cqu-mir-989
(16 sentences)

Sequence

acucggucauggggaaacgccgcuaccucgcuuucacuugguggccauagauuucgauaucccaUGUGAUGUGACGUAGUGGUACcuucccuuggcuauucc
....(((((.(((((...((((((((.((((..((((.(((........(((......)))))).)))).)))).))))))))...))))).))))).....

Structure
-acuc     u     aac        c    uu    u   uggccaua   uu 
     gguca gggga   gccgcuac ucgc  ucac ugg        gau  c
     ||||| |||||   |||||||| ||||  |||| |||        |||   
     ucggu cccuu   UGGUGAUG AGUG  AGUG acc        cua  g
ccuua     u     cCA        C    -U    U   --------   ua 


Annotation confidence Not enough data
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Genome context
supercont3.315: 321300-321401 [+]

Database links

Mature cqu-miR-989

Accession MIMAT0014389
Description Culex quinquefasciatus cqu-miR-989 mature miRNA
Sequence 65 - UGUGAUGUGACGUAGUGGUAC - 85
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119