miRBase entry: cqu-mir-285

Stem-loop cqu-mir-285


Accession
MI0013603
Description
Culex quinquefasciatus cqu-mir-285 precursor miRNA
Gene family
MIPF0000009; mir-29

Literature search
1 open access papers mention cqu-mir-285
(1 sentences)

Sequence

aaguACUGGCUUCCAAAGGUGAGUAGAuggcauucgauaucgcucUAGCACCAUUCGAAAUCAGUAC
..(((((((.(((.((.((((..((((..((..........)))))).)))).)).))).)))))))

Structure
aa       C   C  A    AG    ug  auuc 
  guACUGG UUC AA GGUG  UAGA  gc    g
  ||||||| ||| || ||||  ||||  ||     
  CAUGACU AAG UU CCAC  AUcu  cg    a
--       A   C  A    -G    --  cuau 


Annotation confidence Not enough data
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Genome context
supercont3.98: 262290-262356 [-]

Database links

Mature cqu-miR-285-5p

Accession MIMAT0014410
Description Culex quinquefasciatus cqu-miR-285-5p mature miRNA
Sequence 5 - ACUGGCUUCCAAAGGUGAGUAGA - 27
Evidence experimental
Illumina [1]

Mature cqu-miR-285-3p

Accession MIMAT0014411
Description Culex quinquefasciatus cqu-miR-285-3p mature miRNA
Sequence 46 - UAGCACCAUUCGAAAUCAGUAC - 67
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20167119
    Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
    Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
    BMC Genomics (2010) 11:119