miRBase entry: tgu-mir-2976-2

Stem-loop tgu-mir-2976-2


Accession
MI0013674
Description
Taeniopygia guttata tgu-mir-2976-2 precursor miRNA
Gene family
MIPF0000893; mir-2976

Literature search
1 open access papers mention tgu-mir-2976-2
(1 sentences)

Sequence

ccgcucacaugaccaccgugacucgcugcucacgugaccgagcgacgggccgggccgggccgcggcggagccggaGCGGAGCGGAGCGGAGCGGGGccgggccgggacgg
((((((...((.((.((((..(.(.((((((.(((..(((.((..(..(((((((...))).)))))..))))).))))))))).).)..)))))).))....))).)))

Structure
   -   -aca  a  a    ga u g      a   ga   a  ga gg    -   c 
ccg cuc    ug cc ccgu  c c cugcuc cgu  ccg gc  c  gccg ggc  
||| |||    || || ||||  | | |||||| |||  ||| ||  |  |||| ||| g
ggc ggg    gc GG GGCG  G G GGCGAG GCG  ggc cg  g  cggc ccg  
   a   ccgg  c  -    AG C A      -   -a   -  ag --    g   g 


Annotation confidence Not enough data
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Genome context
chr1: 113831865-113831974 [+]

Database links

Mature tgu-miR-2976

Accession MIMAT0014486
Description Taeniopygia guttata tgu-miR-2976 mature miRNA
Sequence 76 - GCGGAGCGGAGCGGAGCGGGG - 96
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20360741
    The genome of a songbird
    "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
    "Nature (2010) 464:757-762