miRBase entry: tgu-mir-2981

Stem-loop tgu-mir-2981


Accession
MI0013679
Description
Taeniopygia guttata tgu-mir-2981 precursor miRNA


Sequence

gccgccgccaccgccccccgggcgucacccgcgccgcgcccgcccccgcccgggcaccgcgggaccggCCGGGCCGGGCGGGCGGGgagcggc
(((((..((.(((((((((((......((((.((((..(((((.(((....)))....)))))..))))))))))))).)))))))).)))))

Structure
     cg  a      -     gcguca    c    cg     ---c   g 
gccgc  cc ccgccc cccgg      cccg gccg  cccgc    ccc c
|||||  || |||||| |||||      |||| ||||  |||||    |||  
cggcg  gG GGCGGG GGGCC      GGGC Cggc  gggcg    ggg c
     -a  -      C     ------    -    ca     ccac   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr2: 66507055-66507147 [-]

Database links

Mature tgu-miR-2981

Accession MIMAT0014491
Description Taeniopygia guttata tgu-miR-2981 mature miRNA
Sequence 69 - CCGGGCCGGGCGGGCGGG - 86
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20360741
    The genome of a songbird
    "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
    "Nature (2010) 464:757-762