Stem-loop tgu-mir-2983

Accession

MI0013681

Description

Taeniopygia guttata tgu-mir-2983 precursor miRNA

Literature search

1 open access papers mention tgu-mir-2983
(2 sentences)

Sequence

ccggacuggcuccaucaagccuguuggaacagcaggaaccggccUUUCCAGCAGGCUUGAUGGAGccagucugg
(((((((((((((((((((((((((((((..((........))..)))))))))))))))))))))))))))))

Structure

                             ca  agg 
ccggacuggcuccaucaagccuguuggaa  gc   a
|||||||||||||||||||||||||||||  ||    
ggucugaccGAGGUAGUUCGGACGACCUU  cg   a
                             Uc  gcc 

Annotation confidence Not enough data

Genome context

chr5: 14115790-14115863 [+]

Mature tgu-miR-2983

• Accession: MIMAT0014493
• Description: Taeniopygia guttata tgu-miR-2983 mature miRNA
• Sequence: 45 - UUUCCAGCAGGCUUGAUGGAG - 65
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20360741
   The genome of a songbird
   "Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li"
   "Nature (2010) 464:757-762


2. PubMed ID: 23268654
   Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression
   Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X
   BMC Genomics (2012) 13:727