Stem-loop sequence tgu-mir-7-3

AccessionMI0013706 (change log)
DescriptionTaeniopygia guttata miR-7-3 stem-loop
Gene family MIPF0000022; mir-7
Literature search

1 open access papers mention tgu-mir-7-3
(5 sentences)

Stem-loop 
   ugcuucccugu  -a     a       u     u  au  cu 
5'            gg  agacu gugauuu guugu gu  gg  c
              ||  ||||| ||||||| ||||| ||  ||   
3'            cc  ucuga cacugaa caaca ca  cc  a
   ----------u  cg     -       -     c  --  cu
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (taeGlu3.2.4) Overlapping transcripts
chr10: 13225597-13225669 [-]
sense
ENSTGUT00000018311 ; tgu-mir-7-2-201; exon 1
Clustered miRNAs
< 10kb from tgu-mir-7-3
tgu-mir-7-3chr10: 13225597-13225669 [-]
tgu-mir-7-2chr10: 13221462-13221534 [-]
Database links

Mature sequence tgu-miR-7-5p

Accession MIMAT0014510
Previous IDstgu-miR-7
Sequence

11 -  

uggaagacuagugauuuuguugu

 - 33

Get sequence
Evidence experimental; 454 [1], Illumina [1-2]

References

1
PMID:20360741 "The genome of a songbird" Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li Nature. 464:757-762(2010).
2
PMID:23268654 "Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression" Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X BMC Genomics. 13:727(2012).