Stem-loop sequence tgu-mir-451

AccessionMI0013747 (change log)
DescriptionTaeniopygia guttata miR-451 stem-loop
Gene family MIPF0000148; mir-451
Literature search

1 open access papers mention tgu-mir-451
(5 sentences)

Stem-loop 
   --------------gccggcgg    a               a 
5'                       ggaa ccguuaccauuacug g
                         |||| |||||||||||||||  
3'                       ucuu ggcaaugguaaugau u
   acggcggaacggccggcagccg    -               u
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (taeGlu3.2.4) Overlapping transcripts
chr19: 7265342-7265414 [-]
sense
Clustered miRNAs
< 10kb from tgu-mir-451
tgu-mir-144chr19: 7265533-7265602 [-]
tgu-mir-451chr19: 7265342-7265414 [-]
Database links

Mature sequence tgu-miR-451

Accession MIMAT0014533
Sequence

11 -  

aaaccguuaccauuacugaguuu

 - 33

Get sequence
Evidence experimental; 454 [1], Illumina [1-2]

References

1
PMID:20360741 "The genome of a songbird" Warren WC, Clayton DF, Ellegren H, Arnold AP, Hillier LW, Kunstner A, Searle S, White S, Vilella AJ, Fairley S, Heger A, Kong L, Ponting CP, Jarvis ED, Mello CV, Minx P, Lovell P, Velho TA, Ferris M, Balakrishnan CN, Sinha S, Blatti C, London SE, Li Y, Li Nature. 464:757-762(2010).
2
PMID:23268654 "Genome-wide annotation and analysis of zebra finch microRNA repertoire reveal sex-biased expression" Luo GZ, Hafner M, Shi Z, Brown M, Feng GH, Tuschl T, Wang XJ, Li X BMC Genomics. 13:727(2012).