miRBase entry: api-mir-278

Stem-loop api-mir-278


Accession
MI0013923
Description
Acyrthosiphon pisum api-mir-278 precursor miRNA
Gene family
MIPF0000155; mir-278


Sequence

acggacgaagguuucaucaaucguguuacagauaaacgugucggUCGGUGGGACUUUCGUUCGUUU
((((((((((((((((((.((((...(((........))).)))).))))))))))))))))))..

Structure
--                  a    ugu   aga 
  acggacgaagguuucauc aucg   uac   u
  |||||||||||||||||| ||||   |||    
  UGCUUGCUUUCAGGGUGG Uggc   gug   a
UU                  C    --u   caa 


Annotation confidence Not enough data
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Genome context
GL349849.1: 357516-357581 [-]

Database links

Mature api-miR-278

Accession MIMAT0014723
Description Acyrthosiphon pisum api-miR-278 mature miRNA
Sequence 45 - UCGGUGGGACUUUCGUUCGUUU - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281