miRBase entry: api-mir-315

Stem-loop api-mir-315


Accession
MI0013932
Description
Acyrthosiphon pisum api-mir-315 precursor miRNA
Gene family
MIPF0000141; mir-315

Literature search
2 open access papers mention api-mir-315
(7 sentences)

Sequence

UUUUGAUUGUUGCUCAGAAAGCCuuucauauauuguacgguggcuuucuagcaauaaucaugacc
...(((((((((((.((((((((..................))))))))))))))))))).....

Structure
--UUU           C        uuucauau 
     UGAUUGUUGCU AGAAAGCC        a
     ||||||||||| ||||||||         
     acuaauaacga ucuuucgg        u
ccagu           -        uggcaugu 


Annotation confidence Not enough data
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Genome context
GL350261.1: 57410-57474 [-]

Database links

Mature api-miR-315

Accession MIMAT0014730
Description Acyrthosiphon pisum api-miR-315 mature miRNA
Sequence 1 - UUUUGAUUGUUGCUCAGAAAGCC - 23
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281