Stem-loop sequence api-mir-3036-5

AccessionMI0013986 (change log)
DescriptionAcyrthosiphon pisum miR-3036-5 stem-loop
Gene family MIPF0001098; mir-3036
Stem-loop
   --    g                uuuaaa 
5'   auug uuucuagaucucagca      u
     |||| ||||||||||||||||       
3'   uaac aaagauuuagggucgu      u
   ua    g                uguuag 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Acyr_2.0; GCA_000142985.2) Overlapping transcripts
GL349621.1: 185932-185989 [-]
intergenic
Clustered miRNAs
< 10kb from api-mir-3036-5
api-mir-3036-2GL349621.1: 186257-186314 [-]
api-mir-3036-1GL349621.1: 186094-186151 [-]
api-mir-3036-5GL349621.1: 185932-185989 [-]
api-mir-3036-4GL349621.1: 185771-185828 [-]
api-mir-3036-3GL349621.1: 185609-185666 [-]
Database links

Mature sequence api-miR-3036

Accession MIMAT0014773
Sequence

1 - 

auugguuucuagaucucagca

 - 21

Get sequence
Evidence experimental; Illumina [1]

References

1
PMID:20444247 "Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum" Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Mereau A, Nicolas J, Tagu D, Jaubert-Possamai S BMC Genomics. 11:281(2010).