miRBase entry: api-mir-3015c

Stem-loop api-mir-3015c


Accession
MI0014013
Description
Acyrthosiphon pisum api-mir-3015c precursor miRNA
Gene family
MIPF0001111; mir-3015


Sequence

guucuuacaauugccgguuaagugucgauuaacuuuAACCAGAUGUUGUAAGAACGA
(((((((((((..(.((((((((........)).)))))).)..)))))))))))..

Structure
--           ug c      -  guc 
  guucuuacaau  c gguuaa gu   g
  |||||||||||  | |||||| ||    
  CAAGAAUGUUG  G CCAAuu ca   a
AG           UA A      u  auu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL350550.1: 174339-174395 [-]

Database links

Mature api-miR-3015c

Accession MIMAT0014794
Description Acyrthosiphon pisum api-miR-3015c mature miRNA
Sequence 37 - AACCAGAUGUUGUAAGAACGA - 57
Evidence

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281