miRBase entry: mmu-mir-669a-5

Stem-loop mmu-mir-669a-5


Accession
MI0014055
Symbol
MGI: Mir669a-5
Description
Mus musculus mmu-mir-669a-5 precursor miRNA
Gene family
MIPF0000316; mir-467

Literature search
15 open access papers mention mmu-mir-669a-5
(22 sentences)

Sequence

23866 reads, 311 reads per million, 100 experiments
ugugcauguguguauAGUUGUGUGUGCAUGUUCAUGUCUauauuugaauauACAUAACAUACACACACACGUAUaaacgcaagcaca
(((((.(((((.((((..((((((((.(((((.((((.(((......))).))))))))).))))))))..)))).))))).)))))

Structure
     a     g    GU        C     C    C   au 
ugugc ugugu uauA  UGUGUGUG AUGUU AUGU Uau  u
||||| ||||| ||||  |||||||| ||||| |||| |||   
acacg acgca aUAU  ACACACAC UACAA UACA aua  u
     a     a    GC        A     -    u   ag 


Annotation confidence High
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Genome context
chr2: 10481761-10481847 [+]
Clustered miRNAs
29 other miRNAs are < 10 kb from mmu-mir-669a-5
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-669a-5p

Accession MIMAT0003477
Description Mus musculus mmu-miR-669a-5p mature miRNA
Sequence 16 - AGUUGUGUGUGCAUGUUCAUGUCU - 39
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mmu-miR-669a-3p

Accession MIMAT0017243
Description Mus musculus mmu-miR-669a-3p mature miRNA
Sequence 52 - ACAUAACAUACACACACACGUAU - 74
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009