miRBase entry: mmu-mir-3093

Stem-loop mmu-mir-3093


Accession
MI0014086
Symbol
MGI: Mir3093
Description
Mus musculus mmu-mir-3093 precursor miRNA

Literature search
2 open access papers mention mmu-mir-3093
(2 sentences)

Sequence

337 reads, 9 reads per million, 12 experiments
cgagcucggcucugcCGCACCCCGCGGAGCUCACACUcgaccuuccagagaagggUGUGGACACCGUGGGAGGUUGGggaggccucg
((((...(.((((.(.((..(((((((.(.((((((....(((((....))))))))))).).)))))))..)).).)))).)))))

Structure
    cuc g    g C  AC       A C      Ucga     c 
cgag   g cucu c GC  CCCGCGG G UCACAC    ccuuc a
||||   | |||| | ||  ||||||| | ||||||    |||||  
gcuc   c gagg G UG  GGGUGCC C GGUGUg    ggaag g
    --- g    G U  GA       A A      ----     a 


Annotation confidence High
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Genome context
chr3: 88215171-88215257 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mmu-mir-3093
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-3093-5p

Accession MIMAT0014907
Description Mus musculus mmu-miR-3093-5p mature miRNA
Sequence 16 - CGCACCCCGCGGAGCUCACACU - 37
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mmu-miR-3093-3p

Accession MIMAT0014908
Description Mus musculus mmu-miR-3093-3p mature miRNA
Sequence 56 - UGUGGACACCGUGGGAGGUUGG - 77
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009