Stem-loop sequence mmu-mir-344f

Accession

MI0014098 (change log)

Symbol

MGI:Mir344f

Description

Mus musculus miR-344f stem-loop

Gene family

MIPF0000267; mir-344

Literature search

10 open access papers mention mmu-mir-344f
(33 sentences)

Stem-loop

   --cc      uc             ------     u 
5'     agucag  uccuggcuggagu      ccagc c
       ||||||  |||||||||||||      ||||| u
3'     ucaguc  aggaccgaucucg      ggucg a
   aaca      -c             gaccuu     a 

Deep sequencing

450 reads, 12.5 reads per million, 24 experiments

Confidence

Annotation confidence: high

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr7: 62046181-62046248 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir344f
• MGI:Mir344f
• RNAcentral:URS000075C6FF_10090
• miRBase Tracker:MI0014098

Mature sequence mmu-miR-344f-5p

• Accession: MIMAT0014931
• Sequence: 3 - agucagucuccuggcuggaguc - 24
• Deep sequencing: 275 reads, 20 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00000E0553_10090
• Predicted targets:
  • TargetScanVert:mmu-miR-344f-5p
  • miRDB:mmu-miR-344f-5p

Mature sequence mmu-miR-344f-3p

• Accession: MIMAT0014932
• Sequence: 46 - cucuagccaggaccugacuac - 66
• Deep sequencing: 175 reads, 17 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00000557E0_10090
• Predicted targets:
  • TargetScanVert:mmu-miR-344f-3p
  • miRDB:mmu-miR-344f-3p

References

1. PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).