miRBase entry: mmu-mir-486b

Stem-loop mmu-mir-486b


Accession
MI0014103
Description
Mus musculus mmu-mir-486b precursor miRNA
Gene family
MIPF0000220; mir-486

Literature search
72 open access papers mention mmu-mir-486b
(605 sentences)

Sequence

1785587 reads, 2348 reads per million, 102 experiments
cccacccugacgcaUCCUGUACUGAGCUGCCCCGAGcugagcacagugaaggaccuCGGGGCAGCUCAGUACAGGAccccucagggaggg
(((.((((((.(..((((((((((((((((((((((((..((...))..))...))))))))))))))))))))))..).)))))).)))

Structure
   a      c ca                      ---  ga  a 
ccc cccuga g  UCCUGUACUGAGCUGCCCCGAG   cu  gc  
||| |||||| |  ||||||||||||||||||||||   ||  || c
ggg gggacu c  AGGACAUGACUCGACGGGGCuc   ga  ug  
   a      c cc                      cag  ag  a 


Annotation confidence High
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Genome context
chr8: 23142573-23142662 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-486b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-486b-5p

Accession MIMAT0014943
Description Mus musculus mmu-miR-486b-5p mature miRNA
Sequence 15 - UCCUGUACUGAGCUGCCCCGAG - 36
Evidence experimental
Illumina [1]
Database links
Predicted targets

Mature mmu-miR-486b-3p

Accession MIMAT0014944
Description Mus musculus mmu-miR-486b-3p mature miRNA
Sequence 57 - CGGGGCAGCUCAGUACAGGA - 76
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009