miRBase entry: oar-mir-125b

Stem-loop oar-mir-125b


Accession
MI0014121
Description
Ovis aries oar-mir-125b precursor miRNA
Gene family
MIPF0000033; mir-10

Literature search
8 open access papers mention oar-mir-125b
(13 sentences)

Sequence

388315 reads, 66006 reads per million, 13 experiments
cgcgcgccucucaaUCCCUGAGACCCUAACUUGUGauguuuaccguuuaaauccacggguuaggcucuugggagcugcgagucgcgcc
.(((((.(((.((.((((.((((.(((((((((((..(((((.....))))).))))))))))).))))))))..)).))).))))).

Structure
c     c   u  -a    U    C           au     c 
 gcgcg cuc ca  UCCC GAGA CCUAACUUGUG  guuua c
 ||||| ||| ||  |||| |||| |||||||||||  ||||| g
 cgcgc gag gu  aggg uucu ggauugggcac  uaaau u
c     u   c  cg    -    c           -c     u 


Annotation confidence Not enough data
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Genome context
chr15: 32240520-32240607 [-]

Database links

Mature oar-miR-125b

Accession MIMAT0014971
Description Ovis aries oar-miR-125b mature miRNA
Sequence 15 - UCCCUGAGACCCUAACUUGUG - 35
Evidence experimental
cloned [1-2]

References

  1. PubMed ID: 20140706
    Characterization of microRNAs from sheep (Ovis aries) using computational and experimental analyses
    "Sheng X, Song X, Yu Y, Niu L, Li S, Li H, Wei C, Liu T, Zhang L, Du L"
    "Mol Biol Rep (2011) 38:3161-3171

  2. PubMed ID: 23269700
    MicroRNA in the ovine mammary gland during early pregnancy: spatial and temporal expression of miR-21, miR-205, and miR-200
    "Galio L, Droineau S, Yeboah P, Boudiaf H, Bouet S, Truchet S, Devinoy E"
    "Physiol Genomics (2013) 45:151-161