miRBase entry: oar-mir-181a-1

Stem-loop oar-mir-181a-1


Accession
MI0014123
Description
Ovis aries oar-mir-181a-1 precursor miRNA
Gene family
MIPF0000007; mir-181

Literature search
4 open access papers mention oar-mir-181a-1
(8 sentences)

Sequence

48016 reads, 7694 reads per million, 13 experiments
ugagcuucgagguugcuucagugAACAUUCAACGCUGUCGGUGAGUuuggaauuaaaaaucaaaaccaucgaccguugauuguacccuauggccaaccaccaucuccacc
.(((......(((((((..((.(.(((.((((((..(((((((.((((.((........)).))))))))))))))))).))).).))..)).))))).....)))....

Structure
---u   cuucga     -  uc  u A   U      CU       A    g  auu 
    gag      gguug cu  ag g ACA UCAACG  GUCGGUG GUuu ga   a
    |||      ||||| ||  || | ||| ||||||  ||||||| |||| ||    
    cuc      ccaac gg  uc c ugu aguugc  cagcuac caaa cu   a
ccac   -uacca     c  ua  c a   u      --       -    a  aaa 


Annotation confidence High
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Genome context
chr12: 75782750-75782859 [-]

Database links

Mature oar-miR-181a

Accession MIMAT0014973
Description Ovis aries oar-miR-181a mature miRNA
Sequence 24 - AACAUUCAACGCUGUCGGUGAGU - 46
Evidence experimental
cloned [1]

References

  1. PubMed ID: 20140706
    Characterization of microRNAs from sheep (Ovis aries) using computational and experimental analyses
    "Sheng X, Song X, Yu Y, Niu L, Li S, Li H, Wei C, Liu T, Zhang L, Du L"
    "Mol Biol Rep (2011) 38:3161-3171