miRBase entry: hsa-mir-3171

Stem-loop hsa-mir-3171


Accession
MI0014202
Symbol
HGNC: MIR3171
Description
Homo sapiens hsa-mir-3171 precursor miRNA


Sequence

111 reads, 11 reads per million, 14 experiments
uauauauagAGAUGUAUGGAAUCUGUAUAUAUCuauauauauguguauauauagauuccauaaaucuauauaug
((((((((((....((((((((((((((((((.(((....))).))))))))))))))))))..))))))))))

Structure
          GAUG                  C   a 
uauauauagA    UAUGGAAUCUGUAUAUAU uau u
||||||||||    |||||||||||||||||| |||  
guauauaucu    auaccuuagauauauaug gua a
          --aa                  u   u 


Annotation confidence Not enough data
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Genome context
chr14: 27633205-27633278 [-]

Disease association
hsa-mir-3171 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-3171

Accession MIMAT0015046
Description Homo sapiens hsa-miR-3171 mature miRNA
Sequence 10 - AGAUGUAUGGAAUCUGUAUAUAUC - 33
Evidence experimental
Illumina [1-2], Northern [3]
Database links
Predicted targets

References

  1. PubMed ID: 20300190
    Characterization of the Melanoma miRNAome by Deep Sequencing
    "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
    "PLoS One (2010) 5:e9685

  2. PubMed ID: 20224791
    Discovery of novel microRNAs in female reproductive tract using next generation sequencing
    Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
    PLoS One (2010) 5:e9637

  3. PubMed ID: 20532037
    Re-inspection of small RNA sequence datasets reveals several novel human miRNA genes
    Hansen TB, Bramsen JB, Kjems J
    PLoS One (2010) 5:e10961