miRBase entry: hsa-mir-3176

Stem-loop hsa-mir-3176


Accession
MI0014210
Symbol
HGNC: MIR3176
Description
Homo sapiens hsa-mir-3176 precursor miRNA

Literature search
1 open access papers mention hsa-mir-3176
(1 sentences)

Sequence

1650 reads, 43 reads per million, 50 experiments
uggccucuccagucugcagcucccggcagccucgggccacacucccgggauccccagggACUGGCCUGGGACUACCGGggguggcggccg
.((((..........((.((((((((.((.(((((((((...(((((((...))).)))).))))))))).)).)))))))).)))))).

Structure
u    ucuccagucu  a        c  c         cac    -   a 
 ggcc          gc gcucccgg ag cucgggcca   uccc ggg  
 ||||          || |||||||| || |||||||||   |||| ||| u
 ccgg          cg ugggGGCC UC GGGUCCGGU   Aggg ccc  
g    ----------  g        A  A         --C    a   c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr16: 543277-543366 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from hsa-mir-3176
Name Accession Chromosome Start End Strand Confidence




Disease association
hsa-mir-3176 is associated with one or more human diseases in the Human microRNA Disease Database
Disease Description Category PubMed ID


Database links

Mature hsa-miR-3176

Accession MIMAT0015053
Description Homo sapiens hsa-miR-3176 mature miRNA
Sequence 60 - ACUGGCCUGGGACUACCGG - 78
Evidence experimental
Illumina [1-2]
Database links
Predicted targets

References

  1. PubMed ID: 20300190
    Characterization of the Melanoma miRNAome by Deep Sequencing
    "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
    "PLoS One (2010) 5:e9685

  2. PubMed ID: 21199797
    Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
    "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
    "Cancer Res (2011) 71:78-86