miRBase entry: hsa-mir-3189

Stem-loop hsa-mir-3189


Accession
MI0014233
Symbol
HGNC: MIR3189
Description
Homo sapiens hsa-mir-3189 precursor miRNA

Literature search
1 open access papers mention hsa-mir-3189
(1 sentences)

Sequence

51 reads, 12 reads per million, 9 experiments
gccucaguUGCCCCAUCUGUGCCCUGGGUAGGAauauccuggaucCCCUUGGGUCUGAUGGGGUAGccgaugc
((.((.(((((((((((.(.((((.((((((((...)))))....)))..))))).))))))))))).)).))

Structure
  c  a           U U    -U   ----     a 
gc uc guUGCCCCAUC G GCCC  GGG    UAGGA  
|| || ||||||||||| | ||||  |||    ||||| u
cg ag cGAUGGGGUAG C UGGG  CCC    guccu  
  u  c           U -    UU   cuag     a 


Annotation confidence High
Do you think this miRNA is real?

Genome context
chr19: 18386562-18386634 [+]

Database links

Mature hsa-miR-3189-3p

Accession MIMAT0015071
Description Homo sapiens hsa-miR-3189-3p mature miRNA
Sequence 46 - CCCUUGGGUCUGAUGGGGUAG - 66
Evidence experimental
Illumina [1-2]
Database links
Predicted targets

Mature hsa-miR-3189-5p

Accession MIMAT0019217
Description Homo sapiens hsa-miR-3189-5p mature miRNA
Sequence 9 - UGCCCCAUCUGUGCCCUGGGUAGGA - 33
Evidence experimental
Illumina [2]

References

  1. PubMed ID: 20300190
    Characterization of the Melanoma miRNAome by Deep Sequencing
    "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
    "PLoS One (2010) 5:e9685

  2. PubMed ID: 21199797
    Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
    "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
    "Cancer Res (2011) 71:78-86