Stem-loop bmo-mir-2808d

Accession

MI0014260

Description

Bombyx mori bmo-mir-2808d precursor miRNA

Gene family

MIPF0000836; mir-2808

Literature search

1 open access papers mention bmo-mir-2808d
(1 sentences)

Sequence

321 reads, 68 reads per million, 3 experiments

ggaguauugcuaacacugguccuagcaaaagcagugcuucgcagaaucuacgaccggauuggaaaugcgacccacugagaagauCCGGCGAGAAGCUCGGUGUGCUgcuuggaauaguucuacguauacuua
.((((((.((((..((((.(((......(((((((((.(((.((..(((.((.(((((((.....................))))))))))))..))))).)))))))))))).))))..)).)))))))).

Structure

g      u  -  ac    g   uagcaa         u   c  aa   a  a       ggaaaugcg 
 gaguau gc ua  acug ucc      aagcagugc ucg ag  ucu cg ccggauu         a
 |||||| || ||  |||| |||      ||||||||| ||| ||  ||| || |||||||         c
 uucaua ug au  ugau agg      uucgUCGUG GGC UC  AGA GC GGCCuag         c
a      -  c  cu    a   ------         U   -  GA   -  -       aagagucac 

Annotation confidence Not enough data

Genome context

NW_004582028.1: 418407-418538 [-]

Mature bmo-miR-2808d

• Accession: MIMAT0015386
• Description: Bombyx mori bmo-miR-2808d mature miRNA
• Sequence: 85 - CCGGCGAGAAGCUCGGUGUGCU - 106
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415