Stem-loop bmo-mir-3218

Accession

MI0014271

Description

Bombyx mori bmo-mir-3218 precursor miRNA

Sequence

gauccauaauaauuugauaugagacaAGUCAUACACAGAGUGAGCAGCGuugagguauggucgaggcaucacuccccuccugagcaugacucugcgcuaugaacugacccuuauuauuuagguc
...........((((((.(((((...((((((((.((((((...((..(((.(((...((..(((......))).)).))).))).)))))))).).)))).)))....)))))...)))))).

Structure

gauccauaaua      --u     -aca   -    - A      GAG  GC   g   uau  uc   gc 
           auuuga   augag    AGU CAUA C CAGAGU   CA  Guu agg   gg  gag  a
           ||||||   |||||    ||| |||| | ||||||   ||  ||| |||   ||  |||   
           uggauu   uauuc    uca guau g gucuca   gu  cga ucc   cc  cuc  u
----------c      uau     ccag   a    c c      ---  -a   g   --u  -c   ac 

Annotation confidence Not enough data

Genome context

NW_004582010.1: 5146933-5147056 [+]

Mature bmo-miR-3218

• Accession: MIMAT0015398
• Description: Bombyx mori bmo-miR-3218 mature miRNA
• Sequence: 27 - AGUCAUACACAGAGUGAGCAGCG - 49
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415