miRBase entry: bmo-mir-3219

Stem-loop bmo-mir-3219


Accession
MI0014272
Description
Bombyx mori bmo-mir-3219 precursor miRNA


Sequence

70 reads, 13 reads per million, 3 experiments
cgacgauccugaucaggucaccgGUGAGACUAAUAUAUCCAUGGUGUuauuuuuuuuuaaugaucaauuauuucuuucauuggucuacaccaugcauuuuuaaucucaggguucucugaagaauaucaucu
.((.(((..(..(((((..(((..(((((.(((......((((((((..............(((((((.(......).))))))).)))))))).....))).))))).)))..)))))..)..))).)).

Structure
c  c   cc ga     uc   gG     C   UAUAUC        uauuuuuuuuuaau       u uu 
 ga gau  u  ucagg  acc  UGAGA UAA      CAUGGUGU              gaucaau a  u
 || |||  |  |||||  |||  ||||| |||      ||||||||              ||||||| |   
 cu cua  a  agucu  ugg  acucu auu      guaccaca              cugguua u  c
u  a   ua ga     cu   -g     a   -uuuac        -------------u       c uu 


Annotation confidence Not enough data
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Genome context
NW_004582010.1: 5219180-5219310 [+]

Database links

Mature bmo-miR-3219

Accession MIMAT0015399
Description Bombyx mori bmo-miR-3219 mature miRNA
Sequence 24 - GUGAGACUAAUAUAUCCAUGGUGU - 47
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415