Stem-loop bmo-mir-3227

Accession

MI0014281

Description

Bombyx mori bmo-mir-3227 precursor miRNA

Gene family

MIPF0000826; mir-2807

Sequence

uaaaaucuggcaaaauaauauagucauUAGCAAUUUUUCAGGACGCUCGGaccccaaagacgucaucaguguguuuagugugaguuaacguaaaaguuaaugcuuuguauggaauuguaacguuugccuaaguuugc
........(((((((((((.((..((..((((((((((..(...(((((.((...(((.(((.(....)))).))).)).)))))...)..))))))...)))).))..))..)))))....)))))).........

Structure

-uaaaaucu      ----     -a  gu  uU    ---      CA GAC     G  ccc   g   u a 
         ggcaaa    auaau  ua  ca  AGCA   AUUUUU  G   GCUCG ac   aaa acg c u
         ||||||    |||||  ||  ||  ||||   ||||||  |   ||||| ||   ||| ||| |  
         ccguuu    uguua  gu  gu  ucgu   ugaaaa  c   ugagu ug   uuu ugu g c
cguuugaau      gcaa     ag  au  -u    aau      ug aau     g  --a   g   - a 

Annotation confidence Not enough data

Genome context

NW_004582009.1: 10373555-10373691 [-]

Mature bmo-miR-3227

• Accession: MIMAT0015409
• Description: Bombyx mori bmo-miR-3227 mature miRNA
• Sequence: 28 - UAGCAAUUUUUCAGGACGCUCGG - 50
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415