miRBase entry: bmo-mir-3243

Stem-loop bmo-mir-3243


Accession
MI0014298
Description
Bombyx mori bmo-mir-3243 precursor miRNA


Sequence

32 reads, 8 reads per million, 3 experiments
guaucuaaauguuuucacgaacgacuuuuacggugaaggaauaacaucagauuauucuacgucuuauauguguaaugcuguauugacggaaauuuaguuUGGAACAUUCCAGUCGUUCGUAgcgccauuuuguuuuuagaugu
.((((((((((((...((((((((((...........(((((....((((((((.....((((.((((.((.....))))))..))))......))))))))...)))))))))))))))))))..........)))))))).

Structure
g        ----------    uuc          uuuacggugaa     aaca        -uucua    -u    u  g 
 uaucuaaa          uguu   acgaacgacu           ggaau    ucagauua      cguc  uaua gu u
 ||||||||          ||||   ||||||||||           |||||    ||||||||      ||||  |||| || a
 guagauuu          gcgA   UGCUUGCUGA           CCUUA    GGUuugau      gcag  augu cg a
u        uuguuuuacc    ---          -----------     -CAA        uuaaag    uu    -  u 


Annotation confidence Not enough data
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Genome context
NW_004581687.1: 2846647-2846789 [-]

Database links

Mature bmo-miR-3243

Accession MIMAT0015425
Description Bombyx mori bmo-miR-3243 mature miRNA
Sequence 100 - UGGAACAUUCCAGUCGUUCGUA - 121
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415